Mercurial > repos > davidvanzessen > extract_duplicates

comparison extract_duplicates.sh @ 2:1f1640608245 draft default tip

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author davidvanzessen
date Tue, 01 Sep 2015 08:34:27 -0400
parents 02cf2dd19564
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1:a3c4e3e62e10 2:1f1640608245
1 input=$1 1 input=$1
2 column=$2 2 column=$2
3 header=$3 3 header=$3
4 out_file=$4 4 regex_filter=$4
5 out_file=$5
5 6
6 dir="$(cd "$(dirname "$0")" && pwd)" 7 dir="$(cd "$(dirname "$0")" && pwd)"
7 Rscript --verbose $dir/extract_duplicates.r ${input} ${column} ${header} ${out_file} 2>&1 8 Rscript --verbose $dir/extract_duplicates.r ${input} ${column} ${header} "${regex_filter}" ${out_file} 2>&1