Mercurial > repos > davidvanzessen > experimental_design_igg

diff experimental_design.py @ 3:a558fed92bcf draft default tip

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author davidvanzessen
date Thu, 10 Jul 2014 07:25:10 -0400
parents f2c4c7151016
children
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line diff
--- a/experimental_design.py	Mon Jul 07 09:45:10 2014 -0400
+++ b/experimental_design.py	Thu Jul 10 07:25:10 2014 -0400
@@ -14,7 +14,7 @@
 			files = []
 			sample_id = arg
 		else:
-			df = pd.read_csv(arg, sep="\t")
+			df = pd.read_csv(arg, sep="\t", dtype=object)
 			if "Functionality" in list(df.columns.values):
 				df["VDJ Frame"][df["Functionality"] != "productive"] = "In-frame with stop codon"
 				imgt_files += 1