Mercurial > repos > davidvanzessen > clonal_sequences_in_paired_samples

comparison RScript.r @ 46:bec38379cf69 draft

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Uploaded
author davidvanzessen
date Thu, 17 Sep 2015 10:59:08 -0400
parents 570fef3d876f
children 2cf89b865202
comparison
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45:570fef3d876f 46:bec38379cf69
247 247
248 } else { 248 } else {
249 patient.fuzzy = patient.fuzzy[-1,] 249 patient.fuzzy = patient.fuzzy[-1,]
250 } 250 }
251 251
252 } else if (sum(match.filter) > 2){ 252 } else if (sum(match.filter) > 1){
253 cat(paste("<tr><td>", "Multiple matches found for", first.merge, "in", patient, "</td></tr>", sep=""), file=logfile, append=T) 253 cat(paste("<tr><td>", "Multiple matches (", sum(match.filter), ") found for", first.merge, "in", patient"</td></tr>", sep=" "), file=logfile, append=T)
254 patient.fuzzy = patient.fuzzy[-1,] 254 patient.fuzzy = patient.fuzzy[-1,]
255 } else { 255 } else {
256 patient.fuzzy = patient.fuzzy[-1,] 256 patient.fuzzy = patient.fuzzy[-1,]
257 } 257 }
258 258