Mercurial > repos > davidvanzessen > change_o
diff create_germlines.sh @ 1:326165da9ece draft
Uploaded
| author | davidvanzessen |
|---|---|
| date | Thu, 04 Aug 2016 08:59:47 -0400 |
| parents | dda9b2e72e2b |
| children | 6f57d43a1f4c |
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--- a/create_germlines.sh Tue May 03 09:52:21 2016 -0400 +++ b/create_germlines.sh Thu Aug 04 08:59:47 2016 -0400 @@ -16,7 +16,7 @@ mkdir $PWD/outdir -#/home/galaxy/anaconda3/bin/python $dir/CreateGermlines.py -d $PWD/input.tab -r $germline --outdir $PWD/outdir --outname output -g $type $cloned -/data/users/david/anaconda3/bin/python $dir/CreateGermlines.py -d $PWD/input.tab -r $dir/IMGT_Human_IGH[VDJ].fasta --outdir $PWD/outdir --outname output -g $type $cloned +/home/galaxy/anaconda3/bin/python $dir/CreateGermlines.py -d $PWD/input.tab -r $dir/IMGT_Human_IGH[VDJ].fasta --outdir $PWD/outdir --outname output -g $type $cloned +#/data/users/david/anaconda3/bin/python $dir/CreateGermlines.py -d $PWD/input.tab -r $dir/IMGT_Human_IGH[VDJ].fasta --outdir $PWD/outdir --outname output -g $type $cloned mv $PWD/outdir/output_germ-pass.tab $output