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comparison makedb.sh @ 6:3ddd933dd7a2 draft default tip

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author davidvanzessen
date Thu, 15 Sep 2016 03:54:33 -0400
parents 6f57d43a1f4c
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5:3d97839fda21 6:3ddd933dd7a2
25 regions="" 25 regions=""
26 fi 26 fi
27 27
28 mkdir $PWD/outdir 28 mkdir $PWD/outdir
29 29
30 /data/users/david/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions 30 python3 $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
31 #/data/users/david/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
31 #/home/galaxy/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions 32 #/home/galaxy/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
32 33
33 mv $PWD/outdir/output_db-pass.tab $output 34 mv $PWD/outdir/output_db-pass.tab $output