# HG changeset patch
# User davidvanzessen
# Date 1463485146 14400
# Node ID 94712d05ebea9790f3339480a648f9f2c25c889c
# Parent  90290b69e8f8a6cdb6ebdd01c748fd393375366e
Uploaded

diff -r 90290b69e8f8 -r 94712d05ebea tool_dependencies.xml
--- a/tool_dependencies.xml	Tue May 17 05:50:23 2016 -0400
+++ b/tool_dependencies.xml	Tue May 17 07:39:06 2016 -0400
@@ -11,18 +11,66 @@
                         <package name="package_r_3_2_1" version="3.2.1" />
                     </repository>
                     <package>
+                        https://cran.ism.ac.jp/src/contrib/BH_1.60.0-2.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/DBI_0.4-1.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/lazyeval_0.1.10.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/magrittr_1.5.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/Rcpp_0.12.5.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/R6_2.1.2.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/assertthat_0.1.tar.gz
+                    </package>
+                    <package>
                         https://cran.ism.ac.jp/src/contrib/dplyr_0.4.3.tar.gz
                     </package>
                     <package>
+                        https://cran.ism.ac.jp/src/contrib/ade4_1.7-4.tar.gz
+                    </package>
+                    <package>
                         https://cran.ism.ac.jp/src/contrib/seqinr_3.1-3.tar.gz
                     </package>
                     <package>
-                        https://cran.ism.ac.jp/src/contrib/lazyeval_0.1.10.tar.gz
+                        https://cran.ism.ac.jp/src/contrib/RColorBrewer_1.1-2.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/dichromat_2.0-0.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/plyr_1.8.3.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/munsell_0.4.3.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/labeling_0.3.tar.gz
                     </package>
                     <package>
                         https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/scales_0.3.0.tar.gz
                     </package>
                     <package>
+                        https://cran.ism.ac.jp/src/contrib/proto_0.3-10.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/reshape2_1.4.1.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/gtable_0.2.0.tar.gz
+                    </package>
+                    <package>
+                        https://cran.ism.ac.jp/src/contrib/digest_0.6.9.tar.gz
+                    </package>
+                    <package>
                         https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/ggplot2_1.0.1.tar.gz
                     </package>
                     <package>