# HG changeset patch
# User cropgeeks
# Date 1488979802 18000
# Node ID e315786fe58996a5c97f5be273585726a156a79c
# Parent  3b24d5f12d06695b0c7305bdfbbc641a6f72645f
Uploaded

diff -r 3b24d5f12d06 -r e315786fe589 mabcstats.xml
--- a/mabcstats.xml	Wed Mar 08 08:14:23 2017 -0500
+++ b/mabcstats.xml	Wed Mar 08 08:30:02 2017 -0500
@@ -19,7 +19,9 @@
     $advanced_options.decimalEnglish
   #end if
   -output=$output
-  -project=$project
+  #if $create_project.create
+	-project=$project
+  #end if	
   ]]></command>
 
   <inputs>
@@ -55,12 +57,21 @@
 			  <option value="256m">256MB</option>
 			</param>
 		</when>
+	</conditional>
+	
+	<conditional name="create_project">
+		<param name="create" type="boolean" label="Also create Flapjack project file"
+			truevalue="true" falsevalue="false" help="Creates an additional Flapjack project file containing the MABC results.">
+		</param>
 	</conditional>	
   </inputs>
   
   <outputs>
     <data format="tabular" name="output" />
-	<data format="flapjack" name="project" />
+	<data format="flapjack" name="project">
+		<filter>create == "true"</filter>
+	</data> 
+	
   </outputs>
   
   <stdio>