# HG changeset patch
# User cropgeeks
# Date 1487755007 18000
# Node ID 78ee000797712de5f2fc814cab74949c3b31727e
# Parent  b08d07a7c87986f510707976a2d40adea3456306
Uploaded

diff -r b08d07a7c879 -r 78ee00079771 jnlp.xml
--- a/jnlp.xml	Tue Feb 21 11:09:15 2017 -0500
+++ b/jnlp.xml	Wed Feb 22 04:16:47 2017 -0500
@@ -1,8 +1,8 @@
 <display id="flapjack_project" version="1.0.0" name="display in Flapjack">
     <link id="main" name="main">
-        <url>http://genome.ucsc.edu/cgi-bin/hgTracks?db=${qp($bam_file.dbkey)}&amp;hgt.customText=${qp($track.url)}</url>
-        <param type="data" name="bam_file" url="galaxy.bam" />
-        <param type="data" name="bai_file" url="galaxy.bam.bai" metadata="bam_index" /><!-- UCSC expects index file to exist as bam_file_name.bai -->
-        <param type="template" name="track" viewable="True">track type=bam name="${bam_file.name}" bigDataUrl=${bam_file.url} db=${bam_file.dbkey}</param>
+        <url>http://bioinf.hutton.ac.uk/flapjack/webstart/flapjack.jnlp</url>
+        <!--<param type="data" name="bam_file" url="galaxy.bam" />
+        <param type="data" name="bai_file" url="galaxy.bam.bai" metadata="bam_index" /><!-- UCSC expects index file to exist as bam_file_name.bai
+        <param type="template" name="track" viewable="True">track type=bam name="${bam_file.name}" bigDataUrl=${bam_file.url} db=${bam_file.dbkey}</param>-->
     </link>
 </display>
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