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comparison jnlp.xml @ 11:78ee00079771 draft

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Uploaded
author cropgeeks
date Wed, 22 Feb 2017 04:16:47 -0500
parents 735f690bdb76
children 20d1c672e705
comparison
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10:b08d07a7c879 11:78ee00079771
1 <display id="flapjack_project" version="1.0.0" name="display in Flapjack"> 1 <display id="flapjack_project" version="1.0.0" name="display in Flapjack">
2 <link id="main" name="main"> 2 <link id="main" name="main">
3 <url>http://genome.ucsc.edu/cgi-bin/hgTracks?db=${qp($bam_file.dbkey)}&amp;hgt.customText=${qp($track.url)}</url> 3 <url>http://bioinf.hutton.ac.uk/flapjack/webstart/flapjack.jnlp</url>
4 <param type="data" name="bam_file" url="galaxy.bam" /> 4 <!--<param type="data" name="bam_file" url="galaxy.bam" />
5 <param type="data" name="bai_file" url="galaxy.bam.bai" metadata="bam_index" /><!-- UCSC expects index file to exist as bam_file_name.bai --> 5 <param type="data" name="bai_file" url="galaxy.bam.bai" metadata="bam_index" /><!-- UCSC expects index file to exist as bam_file_name.bai
6 <param type="template" name="track" viewable="True">track type=bam name="${bam_file.name}" bigDataUrl=${bam_file.url} db=${bam_file.dbkey}</param> 6 <param type="template" name="track" viewable="True">track type=bam name="${bam_file.name}" bigDataUrl=${bam_file.url} db=${bam_file.dbkey}</param>-->
7 </link> 7 </link>
8 </display> 8 </display>