Mercurial > repos > climate > cdo_info

annotate cdo_info.xml @ 0:58f8fc1cb7d7 draft default tip

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"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
author climate
date Sat, 15 Jan 2022 23:18:45 +0000
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58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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1 <tool id="cdo_info" name="CDO get info" profile="20.05" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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2 <description>Climate Data Information Operators to get information on Climate and NWP model data</description>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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3 <macros>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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4 <import>macros.xml</import>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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5 <import>macros_info.xml</import>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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6 </macros>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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7 <expand macro="edam_ontology"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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8 <expand macro="cdo_requirements"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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9 <expand macro="cdo_stdio"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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10 <command><![CDATA[
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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11 cdo
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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12 '$information.opt'
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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13 '$main_infile'
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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14 #if str($information.opt) == 'diff' or str($information.opt) == 'diffn'
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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15 '$information.secondary_infile'
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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16 #end if
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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17 > '$info'
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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18 ]]> </command>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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19 <inputs>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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20 <expand macro="operator_information"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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21 </inputs>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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22 <outputs>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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23 <data name="info" format="txt"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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24 </outputs>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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25 <tests>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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26 <test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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27 <param name="main_infile" ftype="netcdf" value="longitude.nc"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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28 <conditional name="information">
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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29 <param name="opt" value="info" />
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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30 </conditional>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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31 <output name="info" value="longitude.txt" compare="diff" lines_diff="2"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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32 </test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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33 <test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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34 <param name="main_infile" ftype="netcdf" value="latitude.nc"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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35 <conditional name="information">
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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36 <param name="diff" value="info" />
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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37 <param name="secondary_infile" ftype="netcdf" value="latitude_modified.nc"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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38 </conditional>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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39 <output name="info" value="latitude_diff.txt" compare="diff" lines_diff="2"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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40 </test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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41 <test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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42 <param name="main_infile" ftype="netcdf" value="WMI_Lear.nc"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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43 <conditional name="information">
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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44 <param name="opt" value="showdate" />
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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45 </conditional>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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46 <output name="info" value="WMI_Lear_showdate.txt" compare="diff" lines_diff="2"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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47 </test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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48 <test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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49 <param name="main_infile" ftype="netcdf" value="WMI_Lear.nc"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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50 <conditional name="information">
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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51 <param name="opt" value="griddes" />
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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52 </conditional>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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53 <output name="info" value="WMI_Lear_griddes.txt" compare="diff" lines_diff="2"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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54 </test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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55 <test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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56 <param name="main_infile" ftype="netcdf" value="WMI_Lear.nc"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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57 <conditional name="information">
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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58 <param name="opt" value="showname" />
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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59 </conditional>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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60 <output name="info" value="WMI_Lear_names.txt" compare="diff" lines_diff="2"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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61 </test>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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62 </tests>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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63 <help><![CDATA[
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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64
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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65 **CDO Climate Data Information Operators**
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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66 =======================================================================================================
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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67
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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68 This tool is a wrapper to the Climate Data Operators (CDO) for all Information Operators.
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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69
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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70 - CDO Information operators return information about the input file(s). Output is written in a text file.
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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71 - CDO is a collection of command line Operators to manipulate and analyse Climate and NWP model Data.
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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72 - There are more than 600 operators available.
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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73
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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74 - `CDO online documentation <https://code.mpimet.mpg.de/projects/cdo/>`_.
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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75
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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76 ]]> </help>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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77 <expand macro="citations"/>
58f8fc1cb7d7 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
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78 </tool>