Mercurial > repos > climate > cads
annotate README.md @ 0:028c17cfb549 draft default tip
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
| author | climate |
|---|---|
| date | Sat, 19 Jun 2021 18:35:18 +0000 |
| parents | |
| children |
| rev | line source |
|---|---|
|
0
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
1 |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
2 # Copernicus Atmosphere Data Store (ADS) |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
3 |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
4 This tool allows you to retrieve [Copernicus Atmosphere Data Store (ADS)](https://ads.atmosphere.copernicus.eu/cdsapp#!/home). |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
5 |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
6 - Any user willing to use this tool needs to [create a new account](https://ads.atmosphere.copernicus.eu/user/register?destination=/). |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
7 - Compose your request directly on ADS and copy/paste it in the input field "Request" |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
8 - Users need to add their ADS API Key to Galaxy (see below). Documentation on where to get the ADS API key can be found [here](https://ads.atmosphere.copernicus.eu/api-how-to). |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
9 - Be aware that for being able to download dataset from ADS, users also need to agree to their term of use (Licence to use Copernicus Products) on the ADS website. |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
10 |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
11 ## Set up user credentials on Galaxy |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
12 |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
13 To enable users to set their credentials and provide their ADS API Key for this tool, |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
14 make sure the file `config/user_preferences_extra.yml` has the following section: |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
15 |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
16 ``` |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
17 cads_account: |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
18 description: Your Copernicus ADS API Key (Copernicus Atmosphere Data Store API Key) |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
19 inputs: |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
20 - name: cads_apikey |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
21 label: Copernicus ADS API Key |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
22 type: password |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
23 required: True |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
24 ``` |
|
028c17cfb549
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cads commit 778688ee8d14e22b00b648858ad9bd1c2f46b1e0"
climate
parents:
diff
changeset
|
25 |
