Mercurial > repos > blankenberg > plink19_datatypes
comparison plink1_datatypes.xml @ 0:3923de644d90 draft
Create PLINK1.9 datatypes
| author | blankenberg |
|---|---|
| date | Tue, 08 Oct 2019 17:56:00 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:3923de644d90 |
|---|---|
| 1 <?xml version="1.0"?> | |
| 2 <datatypes> | |
| 3 <registration> | |
| 4 <datatype extension="plink.adjusted" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 5 <datatype extension="plink.allele.no.snp" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 6 <datatype extension="plink.annot" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 7 <datatype extension="plink.assoc" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 8 <datatype extension="plink.assoc.dosage" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 9 <datatype extension="plink.assoc.fisher" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 10 <datatype extension="plink.assoc.linear" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 11 <datatype extension="plink.assoc.logistic" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 12 <datatype extension="plink.auto.R" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 13 <datatype extension="plink.beagle.dat" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 14 <datatype extension="plink.bed" type="galaxy.datatypes.binary:Binary" subclass="true" display_in_upload="true"/> | |
| 15 <datatype extension="plink.bed.vmaj" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 16 <datatype extension="plink.bim" type="galaxy.datatypes.binary:Binary" subclass="true" display_in_upload="true"/> | |
| 17 <datatype extension="plink.clst" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 18 <datatype extension="plink.cmh" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 19 <datatype extension="plink.cmh2" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 20 <datatype extension="plink.cnv.overlap" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 21 <datatype extension="plink.cnv.summary" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 22 <datatype extension="plink.cov" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 23 <datatype extension="plink.debug.R" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 24 <datatype extension="plink.dfam" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 25 <datatype extension="plink.diff" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 26 <datatype extension="plink.dist" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 27 <datatype extension="plink.dupvar" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 28 <datatype extension="plink.eigenval" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 29 <datatype extension="plink.fam" type="galaxy.datatypes.binary:Binary" subclass="true" display_in_upload="true"/> | |
| 30 <datatype extension="plink.frq" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 31 <datatype extension="plink.frq.cc" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 32 <datatype extension="plink.frq.count" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 33 <datatype extension="plink.frq.strat" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 34 <datatype extension="plink.frqx" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 35 <datatype extension="plink.fst" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 36 <datatype extension="plink.gen" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 37 <datatype extension="plink.genome" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 38 <datatype extension="plink.gplink" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 39 <datatype extension="plink.grm" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 40 <datatype extension="plink.grm.N.bin" type="galaxy.datatypes.binary:Binary" subclass="true" display_in_upload="true"/> | |
| 41 <datatype extension="plink.grm.bin" type="galaxy.datatypes.binary:Binary" subclass="true" display_in_upload="true"/> | |
| 42 <datatype extension="plink.grm.id" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 43 <datatype extension="plink.het" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 44 <datatype extension="plink.hh" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 45 <datatype extension="plink.hom" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 46 <datatype extension="plink.hom.indiv" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 47 <datatype extension="plink.hom.summary" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 48 <datatype extension="plink.homog" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 49 <datatype extension="plink.hwe" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 50 <datatype extension="plink.ibc" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 51 <datatype extension="plink.imiss" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 52 <datatype extension="plink.indel" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 53 <datatype extension="plink.info" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 54 <datatype extension="plink.irem" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 55 <datatype extension="plink.lasso" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 56 <datatype extension="plink.ld" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 57 <datatype extension="plink.ldset" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 58 <datatype extension="plink.lgen" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 59 <datatype extension="plink.list" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 60 <datatype extension="plink.lmiss" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 61 <datatype extension="plink.map" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 62 <datatype extension="plink.mdist" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 63 <datatype extension="plink.mdist.missing" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 64 <datatype extension="plink.mds" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 65 <datatype extension="plink.mds.eigvals" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 66 <datatype extension="plink.meta" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 67 <datatype extension="plink.mibs" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 68 <datatype extension="plink.missing" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 69 <datatype extension="plink.missing.hap" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 70 <datatype extension="plink.missnp" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 71 <datatype extension="plink.model" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 72 <datatype extension="plink.mperm" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 73 <datatype extension="plink.nearest" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 74 <datatype extension="plink.nopred" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 75 <datatype extension="plink.nosex" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 76 <datatype extension="plink.occur.dosage" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 77 <datatype extension="plink.out.dosage" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 78 <datatype extension="plink.ped" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 79 <datatype extension="plink.perm" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 80 <datatype extension="plink.pphe" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 81 <datatype extension="plink.prob" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 82 <datatype extension="plink.profile" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 83 <datatype extension="plink.prune.in" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 84 <datatype extension="plink.prune.out" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 85 <datatype extension="plink.qassoc" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 86 <datatype extension="plink.qassoc.gxe" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 87 <datatype extension="plink.qassoc.means" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 88 <datatype extension="plink.qfam" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 89 <datatype extension="plink.range.report" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 90 <datatype extension="plink.raw" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 91 <datatype extension="plink.recode.phase.inp" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 92 <datatype extension="plink.recode.strct_in" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 93 <datatype extension="plink.ref" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 94 <datatype extension="plink.rel" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 95 <datatype extension="plink.rel.id" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 96 <datatype extension="plink.rlist" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 97 <datatype extension="plink.sample" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 98 <datatype extension="plink.set" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 99 <datatype extension="plink.set.table" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 100 <datatype extension="plink.sexcheck" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 101 <datatype extension="plink.simfreq" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 102 <datatype extension="plink.skip.3allele" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 103 <datatype extension="plink.snplist" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 104 <datatype extension="plink.tdt" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 105 <datatype extension="plink.tdt.poo" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 106 <datatype extension="plink.tfam" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 107 <datatype extension="plink.tped" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 108 <datatype extension="plink.traw" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 109 <datatype extension="plink.twolocus" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 110 <datatype extension="plink.var.ranges" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 111 <datatype extension="plink.log" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" /> | |
| 112 </registration> | |
| 113 </datatypes> |