Mercurial > repos > blankenberg > package_pybamtools_0_0_2

comparison tool_dependencies.xml @ 1:ece4961bd67e draft default tip

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planemo upload for repository https://github.com/blankenberg/tools-blankenberg/tree/master/packages/package_pybamtools_0_0_2 commit d7f6edac181f160880e231d1944caf1b18406da9
author blankenberg
date Wed, 01 Feb 2017 17:32:44 -0500
parents b9bb96e4c532
children
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0:b9bb96e4c532 1:ece4961bd67e
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="pyBamTools" version="0.0.2"> 3 <package name="pyBamTools" version="0.0.2">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="shell_command">hg clone -r ba0341816b15fff5e0a554658d6579a60e1b12b1 https://bitbucket.org/dan/pybamtools pyBamTools</action> 6 <action type="shell_command">hg clone -r 256db7c4cb78e3a1ebde10de7e871df1081b21f1 https://bitbucket.org/dan/pybamtools pyBamTools</action>
7 <action type="make_directory">$INSTALL_DIR/lib/python</action> 7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action>
9 <action type="set_environment"> 9 <action type="set_environment">
10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
11 </action> 11 </action>