Mercurial > repos > blankenberg > data_manager_bwa_index_builder
comparison tool_data_table_conf.xml.sample @ 1:11e84434ae70
Create bwa indexer data manager.
| author | Daniel Blankenberg <dan@bx.psu.edu> |
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| date | Tue, 21 May 2013 14:26:28 -0400 |
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| 0:3ab19fbb6f63 | 1:11e84434ae70 |
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| 1 <tables> | |
| 2 <!-- Locations of all fasta files under genome directory --> | |
| 3 <table name="all_fasta" comment_char="#"> | |
| 4 <columns>value, dbkey, name, path</columns> | |
| 5 <file path="tool-data/all_fasta.loc" /> | |
| 6 </table> | |
| 7 <!-- Locations of indexes in the BWA mapper format --> | |
| 8 <table name="bwa_indexes" comment_char="#"> | |
| 9 <columns>value, dbkey, name, path</columns> | |
| 10 <file path="tool-data/bwa_index.loc" /> | |
| 11 </table> | |
| 12 <!-- Locations of indexes in the BWA color-space mapper format --> | |
| 13 <table name="bwa_indexes_color" comment_char="#"> | |
| 14 <columns>value, dbkey, name, path</columns> | |
| 15 <file path="tool-data/bwa_index_color.loc" /> | |
| 16 </table> | |
| 17 </tables> |