Mercurial > repos > bgruening > upload_testing

diff reverse.py @ 108:00a775971820 draft

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Uploaded
author bgruening
date Fri, 11 Apr 2014 18:14:57 -0400
parents f258fbfead4b
children 89dd3b812906
line wrap: on
line diff
--- a/reverse.py	Fri Apr 11 17:06:03 2014 -0400
+++ b/reverse.py	Fri Apr 11 18:14:57 2014 -0400
@@ -9,10 +9,8 @@
 
 def main():
     (options, args) = _parse_args()
-    format_args = (options.input, options.output)
-    _run_shell("cat '%s' > '%s'" % format_args)
-    _run_dbtoolkit("com.compomics.dbtoolkit.toolkit.ReverseFASTADB", "'%s' | head --lines -4 >> '%s'" % \
-                       format_args)
+    _run_shell("cat '%s' > '%s'" % (options.input, options.output))
+    _run_dbtoolkit("com.compomics.dbtoolkit.toolkit.ReverseFASTADB", "'%s' | head --lines -4 >> '%s'" % (options.input, options.output), options)
 
 
 def _run_shell(command):