Mercurial > repos > bgruening > text_processing

diff easyjoin.xml @ 26:f22a309187a3 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit c2b1677d1c94433f777c2dc28ac8eec0a99cc6a7
author bgruening
date Fri, 16 Aug 2024 10:41:17 +0000
parents 0e3b611245f7
children
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line diff
--- a/easyjoin.xml	Sat Oct 08 20:59:15 2022 +0000
+++ b/easyjoin.xml	Fri Aug 16 10:41:17 2024 +0000
@@ -1,17 +1,18 @@
-<tool id="tp_easyjoin_tool" name="Join" version="@BASE_VERSION@.2">
+<tool id="tp_easyjoin_tool" name="Join" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>two files</description>
     <macros>
         <import>macros.xml</import>
     </macros>
+    <expand macro="creator"/>
     <expand macro="requirements">
-        <requirement type="package" version="5.22.0.1">perl</requirement>
+        <requirement type="package" version="5.32">perl</requirement>
     </expand>
     <version_command>join --version | head -n 1</version_command>
     <command>
 <![CDATA[
-        cp $__tool_directory__/sort-header ./ &&
+        cp '$__tool_directory__/sort-header' ./ &&
         chmod +x sort-header &&
-        perl $__tool_directory__/easyjoin
+        perl '$__tool_directory__/easyjoin'
             $jointype
             -t $'\t'
             $header
@@ -20,8 +21,8 @@
             $ignore_case
             -1 '$column1'
             -2 '$column2'
-            "$infile1"
-            "$infile2"
+            '$infile1'
+            '$infile2'
             > '$output'
 ]]>
     </command>
@@ -109,7 +110,6 @@
  * The header line (**Fruit  Color  Price**) was joined and kept as first line.
  * Missing values ( Avocado's color, missing from the first file ) are replaced with a period character.
 
-@REFERENCES@
 ]]>
     </help>
     <expand macro="citations" />