Mercurial > repos > bgruening > text_processing
diff cut.xml @ 7:d64eace4f9f3 draft
Uploaded
| author | bgruening |
|---|---|
| date | Sat, 17 Jan 2015 08:30:15 -0500 |
| parents | 8928e6d1e7ba |
| children | c78b1767db2b |
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--- a/cut.xml Thu Jan 08 09:07:31 2015 -0500 +++ b/cut.xml Sat Jan 17 08:30:15 2015 -0500 @@ -116,11 +116,11 @@ <filter type="param_value" column="0" value="^c\d{1,}$" compare="re_search" keep="True"/> <filter type="column_strip" column="0" strip="c"/> <!-- get rid of c's --> <filter type="insert_column" value="1" iterate="True" column="0"/> - <filter type="boolean" column="1" cast="int" /> + <filter type="boolean" column="1" cast="int" /> <filter type="metadata_value" ref="input" name="chromCol" column="1" /> </option> </action> - + <action type="metadata" name="startCol"> <option type="from_param" name="list" column="0" offset="0"> <!-- startCol is 0--> <filter type="multiple_splitter" column="0" separator=","/> @@ -133,7 +133,7 @@ <filter type="metadata_value" ref="input" name="startCol" column="1" /> </option> </action> - + <action type="metadata" name="endCol"> <option type="from_param" name="list" column="0" offset="0"> <!-- endCol is 0--> <filter type="multiple_splitter" column="0" separator=","/> @@ -146,7 +146,7 @@ <filter type="metadata_value" ref="input" name="endCol" column="1" /> </option> </action> - + <action type="metadata" name="nameCol" default="0"> <option type="from_param" name="list" column="0" offset="0"> <!-- nameCol is 0--> <filter type="multiple_splitter" column="0" separator=","/> @@ -159,7 +159,7 @@ <filter type="metadata_value" ref="input" name="nameCol" column="1" /> </option> </action> - + <action type="metadata" name="strandCol" default="0"> <option type="from_param" name="list" column="0" offset="0"> <!-- strandCol is 0--> <filter type="multiple_splitter" column="0" separator=","/>