Mercurial > repos > bgruening > text_processing
diff head.xml @ 1:a4ad586d1403 draft
Uploaded
author | bgruening |
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date | Thu, 05 Sep 2013 11:42:27 -0400 |
parents | ec66f9d90ef0 |
children | 7068d1548234 |
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--- a/head.xml Thu Sep 05 04:58:21 2013 -0400 +++ b/head.xml Thu Sep 05 11:42:27 2013 -0400 @@ -8,7 +8,7 @@ </command> <inputs> - <param format="txt" name="infile" type="data" label="file to cut" /> + <param format="txt" name="infile" type="data" label="File to select" /> <param name="complement" type="select" label="Operation"> <option value="">Keep first lines</option> @@ -27,11 +27,36 @@ <outputs> <data format="input" name="outfile" metadata_source="infile"/> </outputs> + <tests> + <test> + <param name="count" value="10"/> + <param name="infile" value="1.bed"/> + <output name="out_file1" file="eq-showbeginning.dat"/> + </test> + </tests> <help> **What it does** -This tool runs the **head** unix command, which discards lines from the end of a file. +This tool outputs specified number of lines from the **beginning** of a dataset + +----- + +**Example** + +Selecting 2 lines from this:: + + chr7 56632 56652 D17003_CTCF_R6 310 + + chr7 56736 56756 D17003_CTCF_R7 354 + + chr7 56761 56781 D17003_CTCF_R4 220 + + chr7 56772 56792 D17003_CTCF_R7 372 + + chr7 56775 56795 D17003_CTCF_R4 207 + + +will produce:: + + chr7 56632 56652 D17003_CTCF_R6 310 + + chr7 56736 56756 D17003_CTCF_R7 354 + + </help> </tool>