Mercurial > repos > bgruening > text_processing
diff awk.xml @ 1:a4ad586d1403 draft
Uploaded
author | bgruening |
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date | Thu, 05 Sep 2013 11:42:27 -0400 |
parents | ec66f9d90ef0 |
children | fc862d5bccaf |
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--- a/awk.xml Thu Sep 05 04:58:21 2013 -0400 +++ b/awk.xml Thu Sep 05 11:42:27 2013 -0400 @@ -1,5 +1,5 @@ -<tool id="unixtools_awk_tool" name="Awk" version="0.1.1"> - <description></description> +<tool id="unixtools_awk_tool" name="Data-reformatting" version="0.1.1"> + <description>(awk)</description> <requirements> <requirement type="package" version="4.1.0">gnu_awk</requirement> </requirements> @@ -26,15 +26,14 @@ </test> </tests> <outputs> - <data format="input" name="output" metadata_source="input1" - /> + <data format="input" name="output" metadata_source="input"/> </outputs> <configfiles> <configfile name="awk_script"> $url_paste </configfile> </configfiles> -<help> + <help> **What it does** @@ -42,7 +41,10 @@ .. class:: infomark -**TIP:** This tool uses the **extended regular** expression syntax (not the perl syntax). +**TIP:** + +This tool uses the **extended regular** expression syntax (not the perl syntax). +**\\d**, **\\w**, **\\s** etc. are **not** supported. **Further reading** @@ -65,8 +67,6 @@ - - **Pattern Examples** - **$2 == "chr3"** will match lines whose second column is the string 'chr3' @@ -87,12 +87,6 @@ - - - - - - **AWK's Regular Expression Syntax** The select tool searches the data for lines containing or not containing a match to the given pattern. A Regular Expression is a pattern descibing a certain amount of text. @@ -118,7 +112,5 @@ - **\|** Separates alternate possibilities. -**Note**: AWK uses extended regular expression syntax, not Perl syntax. **\\d**, **\\w**, **\\s** etc. are **not** supported. - -</help> + </help> </tool>