diff cut.xml @ 6:8928e6d1e7ba draft

Uploaded
author bgruening
date Thu, 08 Jan 2015 09:07:31 -0500
parents 56e80527c482
children d64eace4f9f3
line wrap: on
line diff
--- a/cut.xml	Wed Jan 07 11:15:41 2015 -0500
+++ b/cut.xml	Thu Jan 08 09:07:31 2015 -0500
@@ -43,7 +43,7 @@
                 <param name="list" type="data_column" data_ref="input" multiple="true" label="List of Fields" help="(-f)" />
             </when>
             <when value="-c">
-                <param name="list" type="text" size="20" value="" label="List of Fields" help="These will be kept/discarded (depending on 'operation'). &lt;BR /&gt; Examples: 1,3,4 or 2-5">
+                <param name="list" type="text" size="20" value="" label="List of characters" help="These will be kept/discarded (depending on 'operation'). &lt;BR /&gt; Examples: 1,3,4 or 2-5">
                     <sanitizer>
                         <valid initial="string.printable">
                             <remove value="&apos;"/>
@@ -185,16 +185,24 @@
     </outputs>
     <tests>
         <test>
-            <param name="list" value="1,4,2,3"/>
-            <param name="delimiter" value="T"/>
-            <param name="input" value="1.bed"/>
-            <output name="output" file="eq-cut.dat"/>
+            <param name="input" value="cut1.txt"/>
+            <param name="list" value="1,3,4"/>
+            <param name="delimiter" value=""/>
+            <output name="output" file="cut_results1.txt"/>
         </test>
         <test>
-            <param name="list" value="1,4,2-3" />
-            <param name="delimiter" value="T" />
-            <param name="input" value="1.bed" />
-            <output name="output" file="eq-cut.dat" />
+            <param name="input" value="cut1.txt"/>
+            <param name="list" value="2" />
+            <param name="delimiter" value="" />
+            <param name="complement" value="--complement" />
+            <output name="output" file="cut_results2.txt"/>
+        </test>
+        <test>
+            <param name="input" value="cut1.txt"/>
+            <param name="list" value="-3" />
+            <param name="delimiter" value="" />
+            <param name="cut_element" value="-c" />
+            <output name="output" file="cut_results3.txt"/>
         </test>
     </tests>
     <help>