--- a/sort_rows.xml	Sun Oct 06 08:22:36 2013 -0400
+++ b/sort_rows.xml	Wed Jan 07 11:10:52 2015 -0500
@@ -1,26 +1,37 @@
-<tool id="tp_sort_rows" name="Sort a row" version="0.0.1">
-  <description>according to their columns</description>
-  <command>python -c 'for line in ["\t".join(sorted(line.strip().split("\t"))) for line in open("$input").readlines() ]: print line' > $outfile</command>
-  <inputs>
-    <param format="tabular" name="input" type="data" label="Tabular file that should be sorted"/>
-  </inputs>
-  <outputs>
-    <data format="tabular" name="outfile" metadata_source="input"/>
-  </outputs>
-  <options sanitize="False"/>
-  <tests>
-
-  </tests>
-  <help>
-
+<tool id="tp_sort_rows" name="Sort a row" version="@BASE_VERSION@.0">
+    <description>according to their columns</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <command>
+<![CDATA[
+    python -c 'for line in ( "\t".join(sorted(line.strip().split("\t"))) for line in open("$infile") ): print line' > $outfile
+]]>
+    </command>
+    <inputs>
+        <param format="tabular" name="infile" type="data" label="Tabular file that should be sorted"/>
+    </inputs>
+    <outputs>
+        <data format="tabular" name="outfile" metadata_source="infile"/>
+    </outputs>
+    <options sanitize="False"/>
+    <tests>
+        <test>
+            <param name="infile" value="sort_rows1.tabular" ftype="tabular" />
+            <output name="outfile" file="sort_rows_results1.bed"/>
+        </test>
+    </tests>
+    <help>
+<![CDATA[
 .. class:: infomark
 
-**TIP:** If your data is not TAB delimited, use *Text Manipulation-&gt;Convert*
+**TIP:** If your data is not TAB delimited, use *Text Manipulation->Convert*
 
 **What it does**
 
 That tool sorts each row in a TAB separated file, according to their columns. In other words: It is a sorted reordering of all columns.
 
-
-</help>
+@REFERENCES@
+]]>
+    </help>
 </tool>