Mercurial > repos > bgruening > text_processing

comparison awk.xml @ 4:56e80527c482 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author bgruening
date Wed, 07 Jan 2015 11:10:52 -0500
parents 7068d1548234
children 8928e6d1e7ba
comparison
equal deleted inserted replaced
3:7068d1548234 4:56e80527c482
1 <tool id="tp_awk_tool" name="Text reformatting" version="0.1.1"> 1 <tool id="tp_awk_tool" name="Text reformatting" version="@BASE_VERSION@.0">
2 <description>with awk</description> 2 <description>with awk</description>
3 <requirements> 3 <macros>
4 <import>macros.xml</import>
5 </macros>
6 <expand macro="requirements">
4 <requirement type="package" version="4.1.0">gnu_awk</requirement> 7 <requirement type="package" version="4.1.0">gnu_awk</requirement>
5 </requirements> 8 </expand>
9 <version_command>awk --version | head -n 1</version_command>
6 <command> 10 <command>
7 awk --sandbox -v FS=\$'\t' -v OFS=\$'\t' --re-interval -f '$awk_script' '$input' &gt; '$output' 11 <![CDATA[
12 awk
13 --sandbox
14 -v FS=\$'\t'
15 -v OFS=\$'\t'
16 --re-interval
17 -f '$awk_script'
18 "$input"
19 > "$output"
20 ]]>
8 </command> 21 </command>
9 <inputs> 22 <inputs>
10 <param format="txt" name="input" type="data" label="File to process" /> 23 <param format="txt" name="input" type="data" label="File to process" />
11 <param name="url_paste" type="text" area="true" size="5x35" label="AWK Program" help=""> 24 <param name="url_paste" type="text" area="true" size="5x35" label="AWK Program" help="">
12 <sanitizer> 25 <sanitizer>
13 <valid initial="string.printable"> 26 <valid initial="string.printable">
14 <remove value="&apos;"/> 27 <remove value="&apos;"/>
15 </valid> 28 </valid>
16 </sanitizer> 29 </sanitizer>
17 </param> 30 </param>
18 </inputs> 31 </inputs>
19 <tests> 32 <configfiles>
33 <configfile name="awk_script">
34 $url_paste
35 </configfile>
36 </configfiles>
37 <outputs>
38 <data format="input" name="output" metadata_source="input"/>
39 </outputs>
40 <tests>
20 <test> 41 <test>
21 <param name="input" value="unix_awk_input1.txt" /> 42 <param name="input" value="unix_awk_input1.txt" />
43 <param name="awk_script" value="$2>0.5 { print $2*9, $1 }" />
22 <output name="output" file="unix_awk_output1.txt" /> 44 <output name="output" file="unix_awk_output1.txt" />
23 <param name="FS" value="tab" />
24 <param name="OFS" value="tab" />
25 <param name="file_data" value="$2>0.5 { print $2*9, $1 }" />
26 </test> 45 </test>
27 </tests> 46 </tests>
28 <outputs>
29 <data format="input" name="output" metadata_source="input"/>
30 </outputs>
31 <configfiles>
32 <configfile name="awk_script">
33 $url_paste
34 </configfile>
35 </configfiles>
36 <help>
37 47
48 <help>
49 <![CDATA[
38 **What it does** 50 **What it does**
39 51
40 This tool runs the unix **awk** command on the selected data file. 52 This tool runs the unix **awk** command on the selected data file.
41 53
42 .. class:: infomark 54 .. class:: infomark
109 - matches the beginning of a line or string. 121 - matches the beginning of a line or string.
110 - indicates negation in a character class. For example, [^...] matches every character except the ones inside brackets. 122 - indicates negation in a character class. For example, [^...] matches every character except the ones inside brackets.
111 - **$** matches the end of a line or string. 123 - **$** matches the end of a line or string.
112 - **\|** Separates alternate possibilities. 124 - **\|** Separates alternate possibilities.
113 125
114 126 @REFERENCES@
127 ]]>
115 </help> 128 </help>
116 </tool> 129 </tool>