Mercurial > repos > bgruening > test_repository_setup_python_environment

comparison tool_dependencies.xml @ 1:52962b810ccc draft

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author bgruening
date Sun, 29 Jun 2014 07:46:30 -0400
parents ee884828d257
children f15a6321aeba
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0:ee884828d257 1:52962b810ccc
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="python" version="2.7"> 3 <package name="python" version="2.7">
4 <repository changeset_revision="d031f8824405" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="c3b5cd4e5ce4" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="pysam" version="0.7.7"> 6 <package name="pysam" version="0.7.7">
7 <install version="1.0"> 7 <install version="1.0">
8 <actions> 8 <actions>
9 <action type="setup_python_environment"> 9 <action type="setup_python_environment">
10 <repository changeset_revision="d031f8824405" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 10 <repository changeset_revision="c3b5cd4e5ce4" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
11 <package name="python" version="2.7" /> 11 <package name="python" version="2.7" />
12 </repository> 12 </repository>
13 <!-- allow downloading and installing an Python package from https://pypi.org/ --> 13 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
14 <package>pysam=0.7.6</package>
15 <package>pysam</package>
16 <package>https://pypi.python.org/packages/source/d/deepTools/deepTools-1.5.8.tar.gz</package> 14 <package>https://pypi.python.org/packages/source/d/deepTools/deepTools-1.5.8.tar.gz</package>
17 </action> 15 </action>
18 16
19 <action type="set_environment"> 17 <action type="set_environment">
20 <environment_variable action="set_to" name="TEST_ENV_VAR">$INSTALL_DIR</environment_variable> 18 <environment_variable action="set_to" name="TEST_ENV_VAR">$INSTALL_DIR</environment_variable>