Mercurial > repos > bgruening > sklearn_stacking_ensemble_models

diff train_test_eval.py @ 7:00819b7f2f55 draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 756f8be9c3cd437e131e6410cd625c24fe078e8c"
author bgruening
date Wed, 22 Jan 2020 12:33:01 +0000
parents 963e449636d3
children b8c92e94ac1d
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line diff
--- a/train_test_eval.py	Thu Nov 07 05:15:47 2019 -0500
+++ b/train_test_eval.py	Wed Jan 22 12:33:01 2020 +0000
@@ -2,6 +2,7 @@
 import joblib
 import json
 import numpy as np
+import os
 import pandas as pd
 import pickle
 import warnings
@@ -29,8 +30,9 @@
 setattr(_search, '_fit_and_score', _fit_and_score)
 setattr(_validation, '_fit_and_score', _fit_and_score)
 
-N_JOBS = int(__import__('os').environ.get('GALAXY_SLOTS', 1))
-CACHE_DIR = './cached'
+N_JOBS = int(os.environ.get('GALAXY_SLOTS', 1))
+CACHE_DIR = os.path.join(os.getcwd(), 'cached')
+del os
 NON_SEARCHABLE = ('n_jobs', 'pre_dispatch', 'memory', '_path',
                   'nthread', 'callbacks')
 ALLOWED_CALLBACKS = ('EarlyStopping', 'TerminateOnNaN', 'ReduceLROnPlateau',