Mercurial > repos > bgruening > sklearn_clf_metrics

diff clf_metrics.xml @ 3:6d1b3653d6a6 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tools/sklearn commit 641ac64ded23fbb6fe85d5f13926da12dcce4e76
author: bgruening
date: Tue, 13 Mar 2018 04:52:18 -0400
parents: 65bd390f50ae
children: f361aac67330
--- a/clf_metrics.xml	Fri Feb 16 14:53:02 2018 -0500
+++ b/clf_metrics.xml	Tue Mar 13 04:52:18 2018 -0400
@@ -27,8 +27,20 @@
 params = json.load(open(input_json_path, "r"))
 
 
-y_t = columns("$clf_metrics.infile1","$clf_metrics.col1")
-y_p = columns("$clf_metrics.infile2","$clf_metrics.col2")
+y_t = read_columns(
+        "$clf_metrics.infile1",
+        "$clf_metrics.col1",
+        sep='\t',
+        header=None,
+        parse_dates=True
+)
+y_p = read_columns(
+        "$clf_metrics.infile2",
+        "$clf_metrics.col2",
+        sep='\t',
+        header=None,
+        parse_dates=True
+)
 
 options = params["clf_metrics"].get("options", {})
 print(options)