Mercurial > repos > bgruening > rnaz_annotate
comparison test-data/snoRNA.aln @ 0:8c250234fe1d draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_team/rnaz commit d261ddb93500e1ea309845fa3989c87c6312583d-dirty
| author | bgruening |
|---|---|
| date | Wed, 30 Jan 2019 03:57:11 -0500 |
| parents | |
| children |
comparison
equal
deleted
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| -1:000000000000 | 0:8c250234fe1d |
|---|---|
| 1 CLUSTAL W(1.81) multiple sequence alignment | |
| 2 | |
| 3 | |
| 4 470004_ENSG00000182512_HUMAN_8267_8506/1-243 GTACCCTCGAGCACACCAGACTTGCAGAAAAAGCATACTCCAGAGGAAGCTGAGGCATGC | |
| 5 470004_ENSMUSG00000021102_MOUSE_8376_8616/1-243 GTACCCTAGAGCACACCAGACTTGCAGAGAAAGCAGACAACAGAGGAAGCTGAGGCATGC | |
| 6 470004_SINFRUG00000145950_FUGU_5916_6140/1-243 --------GGGCACAACAAGGTTGC--AGAAAGCAT-C-CCAAAGGATGAAAAGGCGTGA | |
| 7 470004_ENSRNOG00000004206_RAT_8331_8570/1-243 -TACCCTCGAGCACACCAGACTTGCAGAAAAAGCATACTCCAGAGGAAGCTGAGGCATGC | |
| 8 * ***** ** **** * ****** * ** **** * **** ** | |
| 9 | |
| 10 | |
| 11 470004_ENSG00000182512_HUMAN_8267_8506/1-243 CTGCTCGAGAGCCAGCTGTTCCATGTGCAATTTTCCTCTGATAGTTTCTGGTCACTGTTG | |
| 12 470004_ENSMUSG00000021102_MOUSE_8376_8616/1-243 CTGCTCGAGAGGCAGCAGGCCCATGTGCAATTTTCCTCTGATAGGGCCTGGGTACTGTTG | |
| 13 470004_SINFRUG00000145950_FUGU_5916_6140/1-243 CTTCCAGAGGTCTGGGAATTCCACGTGCGATGTT-CTTTGA-A---CAAACACCTGCTTT | |
| 14 470004_ENSRNOG00000004206_RAT_8331_8570/1-243 CTGCTCGAGAGCCAGCGGTTCCATGTGCAATTTTCCTCTGATAAATCCTGGGTACTGTTG | |
| 15 ** * *** * *** **** ** ** ** *** * ** | |
| 16 | |
| 17 | |
| 18 470004_ENSG00000182512_HUMAN_8267_8506/1-243 CCACGGTGATAATGACTGGGCTATGTCATTATCTATCCGCCAACAGTAAGAGAAGCTTTG | |
| 19 470004_ENSMUSG00000021102_MOUSE_8376_8616/1-243 CCACGGTGATAATGGCTGTGCCGTGTCATTGTCGATCCACCAACAGTCAGAGAAGCTTGG | |
| 20 470004_SINFRUG00000145950_FUGU_5916_6140/1-243 CCACGGTGGCGATGGCCTTGTTCTGTAGCCATCGCATTTCTTGAGGCAGGTAGAAAAAAA | |
| 21 470004_ENSRNOG00000004206_RAT_8331_8570/1-243 CCACGGTGATAATGACTGTGCCGTGTCATTGTCGATCCACCAACAGTCAGAGAAGCTTTG | |
| 22 ******** *** * * *** ** * * * * | |
| 23 | |
| 24 | |
| 25 470004_ENSG00000182512_HUMAN_8267_8506/1-243 CAGTCGAGATATTGTTT--AGCAGATGGAGTGTTTTCTGTTGAACACTAAGTACTGCCAC | |
| 26 470004_ENSMUSG00000021102_MOUSE_8376_8616/1-243 CAGTCAAGATATTGTTT--AGCAGACGGAGCGGTTTCTGTTGGACACTAAGTACTGCCAC | |
| 27 470004_SINFRUG00000145950_FUGU_5916_6140/1-243 CAG-CATGATATTGTTTGAAGCGGGGAGAGCTGTTCCCGTCAGACACTGTCCGCTGTCAC | |
| 28 470004_ENSRNOG00000004206_RAT_8331_8570/1-243 CAGTCAAGATATTGTTT--AGCAGACGGAGCGGTTTCTGTTGGACACTAAGTGCTGCTAC | |
| 29 *** * ********** *** * *** ** * ** ***** *** ** | |
| 30 | |
| 31 | |
| 32 470004_ENSG00000182512_HUMAN_8267_8506/1-243 AA- | |
| 33 470004_ENSMUSG00000021102_MOUSE_8376_8616/1-243 AAA | |
| 34 470004_SINFRUG00000145950_FUGU_5916_6140/1-243 AGC | |
| 35 470004_ENSRNOG00000004206_RAT_8331_8570/1-243 AAG | |
| 36 * |