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comparison XMLValidator.xml @ 4:6ead64a594bd draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/openms commit 7a5239910fda9ed90cca286a38855703b40b1b56-dirty
author bgruening
date Wed, 27 Jan 2016 10:06:49 -0500
parents 3d84209d3178
children
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3:ec62782f6c68 4:6ead64a594bd
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version="1.0" encoding="UTF-8"?>
2 <tool id="XMLValidator" name="XMLValidator" version="1.12.0"> 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
3 <description>Validates XML files against an XSD schema.</description> 3 <!--Proposed Tool Section: [Utilities]-->
4 <macros> 4 <tool id="XMLValidator" name="XMLValidator" version="2.0.0">
5 <token name="@EXECUTABLE@">XMLValidator</token> 5 <description>Validates XML files against an XSD schema.</description>
6 <import>macros.xml</import> 6 <macros>
7 </macros> 7 <token name="@EXECUTABLE@">XMLValidator</token>
8 <expand macro="stdio"/> 8 <import>macros.xml</import>
9 <expand macro="requirements"/> 9 </macros>
10 <command>XMLValidator 10 <expand macro="references"/>
11 <expand macro="stdio"/>
12 <expand macro="requirements"/>
13 <command>XMLValidator
11 14
12 -in ${param_in} 15 #if $param_in:
13 -schema ${param_schema} 16 -in $param_in
14 -threads \${GALAXY_SLOTS:-24} 17 #end if
18 #if $param_schema:
19 -schema $param_schema
20 #end if
21 -threads \${GALAXY_SLOTS:-24}
22 #if $adv_opts.adv_opts_selector=='advanced':
23 #if $adv_opts.param_force:
24 -force
25 #end if
26 #end if
27 &gt; $param_stdout
15 </command> 28 </command>
16 <inputs> 29 <inputs>
17 <param name="param_in" type="data" format="mzML,featureXML,idXML,consensusXML,mzXML,pepXML" optional="False" label="file to validate" help="(-in)"/> 30 <param format="xml,mzml,mzxml,consensusxml,traml,txt,pepxml" help="(-in) " label="file to validate" name="param_in" optional="False" type="data"/>
18 <param name="param_schema" type="data" format="" optional="True" label="schema to validate against.#br#If no schema is given, the file is validated against the latest schema of the file type." help="(-schema)"/> 31 <param format="txt" help="(-schema) &lt;br&gt;If no schema is given, the file is validated against the latest schema of the file type" label="schema to validate against" name="param_schema" optional="True" type="data"/>
19 </inputs> 32 <expand macro="advanced_options">
20 <outputs/> 33 <param checked="false" falsevalue="" help="(-force) " label="Overwrite tool specific checks" name="param_force" optional="True" truevalue="-force" type="boolean"/>
21 <help>**What it does** 34 </expand>
22 35 </inputs>
23 Validates XML files against an XSD schema. 36 <outputs>
37 <data format="text" label="Output from stdout" name="param_stdout"/>
38 </outputs>
39 <help>Validates XML files against an XSD schema.
24 40
25 41
26 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_XMLValidator.html 42 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_XMLValidator.html</help>
27 43 </tool>
28 @REFERENCES@
29 </help>
30 </tool>