Mercurial > repos > bgruening > hicexplorer_hicbuildmatrix

comparison hicBuildMatrix.xml @ 26:a7ab0e43ca99 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 69bb60ab875c1c1769298678f0890d8b92f1899d
author iuc
date Thu, 05 Dec 2024 17:12:45 +0000
parents 37530b4c6fe4
children
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25:37530b4c6fe4 26:a7ab0e43ca99
1 <tool id="hicexplorer_hicbuildmatrix" name="@BINARY@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> 1 <tool id="hicexplorer_hicbuildmatrix" name="@BINARY@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
2 <description>create a contact matrix</description> 2 <description>create a contact matrix</description>
3 <macros> 3 <macros>
4 <token name="@BINARY@">hicBuildMatrix</token> 4 <token name="@BINARY@">hicBuildMatrix</token>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"> 7 <expand macro="requirements"/>
8 <requirement type="package" version="1.19">samtools</requirement>
9 </expand>
10 <command detect_errors="exit_code"><![CDATA[ 8 <command detect_errors="exit_code"><![CDATA[
11 9
12 mkdir ./QCfolder && 10 mkdir ./QCfolder &&
13 mkdir '$qc.files_path' && 11 mkdir '$qc.files_path' &&
14 @BINARY@ 12 @BINARY@