Mercurial > repos > bgruening > graphclust_motif_finder_plot

annotate MotifFinderPlot.xml @ 0:047c451a41fb draft default tip

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planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
author bgruening
date Wed, 22 Feb 2017 17:01:38 -0500
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047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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1 <tool id="motifFinderPlot" name="Motif_Finder_Plot" version="0.1">
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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2 <requirements>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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3 <!-- <requirement type="package" version="2.0.0">matplotlib</requirement> -->
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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4 <!-- <requirement type="package" version='0.19.2'>pandas</requirement> -->
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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5 <requirement type="package" version='0.7.1'>seaborn</requirement>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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6 </requirements>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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7 <stdio>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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8 <exit_code range="1:" />
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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9 </stdio>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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10 <command>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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11 <![CDATA[
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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12 unzip $RESULTS -d "RESULTS" &> /dev/null &&
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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13 python '$__tool_directory__/MotifFinderPlot.py'
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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14 ]]>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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15 </command>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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16 <inputs>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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17 <param type="data" name="RESULTS" format="zip" />
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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18 </inputs>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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19 <outputs>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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20 <data name="motif_plot" format="png" from_work_dir="motif_plot.png" label="motif_plot" />
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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21 </outputs>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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22 <tests>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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23 <test>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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24 <param name="RESULTS" value="RESULTS.zip" ftype="searchgui_archive"/>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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25 <output name="motif_plot" file="motif_plot.png" ftype="png" compare="sim_size" />
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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26 </test>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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27 </tests>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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28 <help>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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29 <![CDATA[
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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30
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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31 ]]>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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32 </help>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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33 <citations>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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34 </citations>
047c451a41fb planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/master/tools/GraphClust/Plotting commit f22de75204914cfbc4df7437ae586e5651bd474b
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35 </tool>