Mercurial > repos > bgruening > deeptools_plot_profile

comparison plotProfiler.xml @ 9:9d7d837a76bf draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit b'a4965adc865b4c85b35ed205bc10821edc104f20'
author bgruening
date Tue, 19 Jan 2016 10:09:50 -0500
parents 4339a4d28e97
children d2205d523d83
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8:4339a4d28e97 9:9d7d837a76bf
155 <expand macro="output_graphic_outputs" /> 155 <expand macro="output_graphic_outputs" />
156 </outputs> 156 </outputs>
157 <tests> 157 <tests>
158 <test> 158 <test>
159 <param name="matrixFile" value="computeMatrix_result1.gz" ftype="deeptools_compute_matrix_archive" /> 159 <param name="matrixFile" value="computeMatrix_result1.gz" ftype="deeptools_compute_matrix_archive" />
160 <output name="outFileName" file="profiler_result1.png" ftype="png" compare="sim_size" delta="100" /> 160 <output name="outFileName" file="profiler_result1.png" ftype="png" compare="sim_size" delta="4000" />
161 </test> 161 </test>
162 <test> 162 <test>
163 <param name="matrixFile" value="computeMatrix_result1.gz" ftype="deeptools_compute_matrix_archive" /> 163 <param name="matrixFile" value="computeMatrix_result1.gz" ftype="deeptools_compute_matrix_archive" />
164 <param name="showAdvancedOpt" value="yes" /> 164 <param name="showAdvancedOpt" value="yes" />
165 <param name="showScaleRegionsOpt" value="yes" /> 165 <param name="showScaleRegionsOpt" value="yes" />
166 <output name="outFileName" file="profiler_result2.png" ftype="png" compare="sim_size" delta="100" /> 166 <output name="outFileName" file="profiler_result2.png" ftype="png" compare="sim_size" delta="4000" />
167 </test> 167 </test>
168 </tests> 168 </tests>
169 <help> 169 <help>
170 <![CDATA[ 170 <![CDATA[
171 171
180 180
181 .. image:: $PATH_TO_IMAGES/visual_profiler_DmelPolII.png 181 .. image:: $PATH_TO_IMAGES/visual_profiler_DmelPolII.png
182 :alt: Meta-gene profile of Rna Polymerase II 182 :alt: Meta-gene profile of Rna Polymerase II
183 183
184 184
185 You can find more details on the profiler doc page: https://deeptools.readthedocs.org/en/release-1.6/content/tools/plotProfile.html 185 You can find more details on the profiler doc page: https://deeptools.readthedocs.org/en/master/content/tools/plotProfile.html
186 186
187 187
188 ----- 188 -----
189 189
190 @REFERENCES@ 190 @REFERENCES@