Mercurial > repos > bgruening > deeptools_plot_pca

diff plotPCA.xml @ 34:528355f62f3a draft

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planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 5a01e3a370130f32a82d5436504371ed95be1754
author bgruening
date Thu, 05 Apr 2018 10:42:13 -0400
parents 94d2a13a344d
children e074335bde9c
line wrap: on
line diff
--- a/plotPCA.xml	Fri Mar 02 15:48:03 2018 -0500
+++ b/plotPCA.xml	Thu Apr 05 10:42:13 2018 -0400
@@ -8,10 +8,10 @@
     <command>
 <![CDATA[
         @BINARY@
-            --corData "$corData"
-            --plotTitle "$plotTitle"
-            --plotFile "$outFileName"
-            --plotFileFormat "$outFileFormat"
+            --corData '$corData'
+            --plotTitle '$plotTitle'
+            --plotFile '$outFileName'
+            --plotFileFormat '$outFileFormat'
             #if str($advancedOpt.showAdvancedOpt) == 'yes':
                 @PLOTWIDTHHEIGHT@
                 $advancedOpt.log2
@@ -24,7 +24,7 @@
                 #end if
             #end if
             #if $outFileNameData
-                --outFileNameData "$output_outFileNameData"
+                --outFileNameData '$output_outFileNameData'
             #end if
 ]]>
     </command>