Mercurial > repos > bgruening > deeptools_plot_pca
diff plotPCA.xml @ 9:39b7bb209165 draft
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit b'a4965adc865b4c85b35ed205bc10821edc104f20'
| author | bgruening |
|---|---|
| date | Tue, 19 Jan 2016 10:09:12 -0500 |
| parents | c74dd623b281 |
| children | f173cc2d28f9 |
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--- a/plotPCA.xml Wed Dec 23 14:43:17 2015 -0500 +++ b/plotPCA.xml Tue Jan 19 10:09:12 2016 -0500 @@ -1,5 +1,5 @@ <tool id="deeptools_plot_pca" name="plotPCA" version="@WRAPPER_VERSION@.0"> - <description>generate a principal component analysis (PCA) plot from bamCorrelate or bigwigCorrelate output</description> + <description>generate a principal component analysis (PCA) plot from multiBamCoverage or multiBigwigSummary output</description> <macros> <token name="@BINARY@">plotPCA</token> <import>deepTools_macros.xml</import> @@ -15,7 +15,7 @@ ]]> </command> <inputs> - <param name="corData" format="deeptools_coverage_matrix" type="data" label="Matrix file from the bamCorrelate or bigwigCorrelate tools"/> + <param name="corData" format="deeptools_coverage_matrix" type="data" label="Matrix file from the multiBamCoverage or multiBigwigSummary tools"/> <expand macro="input_image_file_format" /> <expand macro="plotTitle" /> </inputs> @@ -24,7 +24,7 @@ </outputs> <tests> <test> - <param name="corData" value="bamCorrelate_result2.npz" ftype="deeptools_coverage_matrix" /> + <param name="corData" value="multiBamCoverage_result2.npz" ftype="deeptools_coverage_matrix" /> <param name="plotTitle" value="Test Plot" /> <param name="outFileFormat" value="png" /> <output name="outFileName" file="plotPCA_result1.png" ftpye="png" compare="sim_size" delta="100" /> @@ -36,7 +36,7 @@ **What it does** Tool for generating a principal component analysis (PCA) -plot from bamCorrelate or bigwigCorrelate output. +plot from multiBamCoverage or multiBigwigSummary output. -----