Mercurial > repos > bgruening > deeptools_plot_pca

comparison deepTools_macros.xml @ 11:f173cc2d28f9 draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 0a9265a12a303b54cdaa974e82e87c2ac60962ee
author bgruening
date Mon, 25 Jan 2016 14:12:29 -0500
parents 39b7bb209165
children 9d66351c718e
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10:7a9ee42ca6e6 11:f173cc2d28f9
70 label="Region of the genome to limit the operation to" 70 label="Region of the genome to limit the operation to"
71 help="This is useful when testing parameters to reduce the time required. The format is chr:start:end, for example "chr10" or "chr10:456700:891000"." /> 71 help="This is useful when testing parameters to reduce the time required. The format is chr:start:end, for example "chr10" or "chr10:456700:891000"." />
72 </xml> 72 </xml>
73 73
74 <token name="@THREADS@">--numberOfProcessors "\${GALAXY_SLOTS:-4}"</token> 74 <token name="@THREADS@">--numberOfProcessors "\${GALAXY_SLOTS:-4}"</token>
75 <token name="@WRAPPER_VERSION@">2.0.0</token> 75 <token name="@WRAPPER_VERSION@">2.0.1.0</token>
76 <xml name="requirements"> 76 <xml name="requirements">
77 <requirements> 77 <requirements>
78 <requirement type="package" version="2.7.10">python</requirement> 78 <requirement type="package" version="2.7.10">python</requirement>
79 <requirement type="binary">@BINARY@</requirement> 79 <requirement type="binary">@BINARY@</requirement>
80 <requirement type="package" version="2.0">deepTools</requirement> 80 <requirement type="package" version="2.0.1">deepTools</requirement>
81 <yield /> 81 <yield />
82 </requirements> 82 </requirements>
83 <expand macro="stdio" /> 83 <expand macro="stdio" />
84 <version_command>@BINARY@ --version</version_command> 84 <version_command>@BINARY@ --version</version_command>
85 </xml> 85 </xml>
183 </xml> 183 </xml>
184 184
185 <xml name="distanceBetweenBins"> 185 <xml name="distanceBetweenBins">
186 <param argument="--distanceBetweenBins" type="integer" value="0" min="0" 186 <param argument="--distanceBetweenBins" type="integer" value="0" min="0"
187 label="Distance between bins" 187 label="Distance between bins"
188 help="By default, multiBamCoverage considers consecutive bins of 188 help="By default, multiBamSummary considers consecutive bins of
189 the specified 'Bin size'. However, to reduce the 189 the specified 'Bin size'. However, to reduce the
190 computation time, a larger distance between bins can 190 computation time, a larger distance between bins can
191 be given. Larger distances result in fewer bins being 191 be given. Larger distances result in fewer bins being
192 considered."/> 192 considered."/>
193 </xml> 193 </xml>