Mercurial > repos > bgruening > deeptools_plot_pca

comparison plotPCA.xml @ 41:9e2dc0d5082a draft default tip

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planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 810c1359b884661d3f5c7372be0f0f88c859a3b9
author bgruening
date Thu, 01 Jun 2023 10:06:06 +0000
parents e074335bde9c
children
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40:6f2e93384b40 41:9e2dc0d5082a
1 <tool id="deeptools_plot_pca" name="plotPCA" version="@WRAPPER_VERSION@.0" profile="18.01"> 1 <tool id="deeptools_plot_pca" name="plotPCA" version="@TOOL_VERSION@+galaxy0" profile="@GALAXY_VERSION@">
2 <description>Generate principal component analysis (PCA) plots from multiBamSummary or multiBigwigSummary output</description> 2 <description>Generate principal component analysis (PCA) plots from multiBamSummary or multiBigwigSummary output</description>
3 <macros> 3 <macros>
4 <token name="@BINARY@">plotPCA</token> 4 <token name="@BINARY@">plotPCA</token>
5 <import>deepTools_macros.xml</import> 5 <import>deepTools_macros.xml</import>
6 </macros> 6 </macros>
76 <param name="corData" value="multiBamSummary_result2b.npz" ftype="deeptools_coverage_matrix" /> 76 <param name="corData" value="multiBamSummary_result2b.npz" ftype="deeptools_coverage_matrix" />
77 <param name="plotTitle" value="Test Plot" /> 77 <param name="plotTitle" value="Test Plot" />
78 <param name="outFileFormat" value="png" /> 78 <param name="outFileFormat" value="png" />
79 <param name="outFileNameData" value="True" /> 79 <param name="outFileNameData" value="True" />
80 <output name="outFileName" file="plotPCA_result2.png" ftype="png" compare="sim_size" delta="12000" /> 80 <output name="outFileName" file="plotPCA_result2.png" ftype="png" compare="sim_size" delta="12000" />
81 <output name="output_outFileNameData" file="plotPCA_result2.tabular" ftype="tabular" /> 81 <output name="output_outFileNameData" file="plotPCA_result2.tabular" ftype="tabular" lines_diff="2" />
82 </test> 82 </test>
83 </tests> 83 </tests>
84 <help> 84 <help>
85 <![CDATA[ 85 <![CDATA[
86 86