Mercurial > repos > bgruening > deeptools_plot_pca

comparison plotPCA.xml @ 8:c74dd623b281 draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 4f515024772311c950d277246db548453d24abd7
author bgruening
date Wed, 23 Dec 2015 14:43:17 -0500
parents 1f9a7501bd38
children 39b7bb209165
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7:4bd03b1a8da7 8:c74dd623b281
1 <tool id="deeptools_plot_pca" name="plotPCA" version="@WRAPPER_VERSION@.0"> 1 <tool id="deeptools_plot_pca" name="plotPCA" version="@WRAPPER_VERSION@.0">
2 <description>generating a principal component analysis (PCA) plot from bamCorrelate or bigwigCorrelate output</description> 2 <description>generate a principal component analysis (PCA) plot from bamCorrelate or bigwigCorrelate output</description>
3 <macros> 3 <macros>
4 <token name="@BINARY@">plotPCA</token> 4 <token name="@BINARY@">plotPCA</token>
5 <import>deepTools_macros.xml</import> 5 <import>deepTools_macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
13 --plotFile "$outFileName" 13 --plotFile "$outFileName"
14 --plotFileFormat "$outFileFormat" 14 --plotFileFormat "$outFileFormat"
15 ]]> 15 ]]>
16 </command> 16 </command>
17 <inputs> 17 <inputs>
18 <param name="corData" format="deeptools_coverage_matrix" type="data" label="Matrix file from the bamCorrelate tool"/> 18 <param name="corData" format="deeptools_coverage_matrix" type="data" label="Matrix file from the bamCorrelate or bigwigCorrelate tools"/>
19 <expand macro="input_image_file_format" /> 19 <expand macro="input_image_file_format" />
20 <expand macro="plotTitle" /> 20 <expand macro="plotTitle" />
21 </inputs> 21 </inputs>
22 <outputs> 22 <outputs>
23 <expand macro="output_image_file_format_not_nested" /> 23 <expand macro="output_image_file_format_not_nested" />