Mercurial > repos > bgruening > deeptools_plot_correlation

diff plotCorrelation.xml @ 8:a48149b2cb5e draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 4f515024772311c950d277246db548453d24abd7
author bgruening
date Wed, 23 Dec 2015 14:41:43 -0500
parents 44d87fb8403e
children 59ca699c7b77
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--- a/plotCorrelation.xml	Wed Dec 23 07:31:58 2015 -0500
+++ b/plotCorrelation.xml	Wed Dec 23 14:41:43 2015 -0500
@@ -92,8 +92,8 @@
 
 This tools takes a compressed matrix of scores (such as read coverages) for a number of genomic regions
 and different samples. It can visualize the correlation among samples as scatterplots or as
-heatmap of correlation coefficients. Further output files are optional.
-The compressed input matrices are easily generated using the "bamCorrelate" and "bigwigCorrelate" modules of deeptools.
+a heatmap of correlation coefficients. Further output files are optional.
+The compressed input matrices are easily generated using the "bamCorrelate" and "bigwigCorrelate" tools.
 
 
 .. image:: $PATH_TO_IMAGES/QC_bamCorrelate_humanSamples.png
@@ -111,7 +111,7 @@
 
 **Output with test dataset**:
 
-Following is the output of plotCorrelation with our test ChIP-Seq datasets. Average coverages were computed over 10kb bins for chromosome X,
+The following is the output of plotCorrelation with our test ChIP-Seq datasets. Average coverages were computed over 10kb bins for chromosome X,
 from bigwig files using bigwigCorrelate. The output was used by plotCorrelation to make a heatmap of spearman correlation between samples.
 
 .. image:: $PATH_TO_IMAGES/plotCorrelation_galaxy_bw_heatmap_output.png