Mercurial > repos > bgruening > deeptools_plot_correlation

comparison plotCorrelation.xml @ 29:b12eb8b54b45 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit b5fc4073c884a2d6a4092ea85150db1971010f28
author bgruening
date Sun, 14 May 2017 18:42:01 -0400
parents cf1409a29f50
children f1518335ac27
comparison
equal deleted inserted replaced
28:3c5197200bbf 29:b12eb8b54b45
12 --plotFile "$outFileName" 12 --plotFile "$outFileName"
13 --corMethod "$corMethod" 13 --corMethod "$corMethod"
14 --whatToPlot "$plotting_type.whatToPlot" 14 --whatToPlot "$plotting_type.whatToPlot"
15 #if str($plotting_type.whatToPlot) == 'heatmap': 15 #if str($plotting_type.whatToPlot) == 'heatmap':
16 @HEATMAP_OPTIONS@ 16 @HEATMAP_OPTIONS@
17 --plotWidth $plotting_type.plotWidth
18 --plotHeight $plotting_type.plotHeight
17 #else: 19 #else:
18 --plotTitle '$plotting_type.plotTitle' 20 --plotTitle '$plotting_type.plotTitle'
19 #end if 21 #end if
20 $skipZeros 22 $skipZeros
21 --plotFileFormat "$outFileFormat" 23 --plotFileFormat "$outFileFormat"
35 <option value="heatmap" selected="True">Heatmap</option> 37 <option value="heatmap" selected="True">Heatmap</option>
36 <option value="scatterplot">Scatterplot</option> 38 <option value="scatterplot">Scatterplot</option>
37 </param> 39 </param>
38 <when value="heatmap"> 40 <when value="heatmap">
39 <expand macro="heatmap_options" /> 41 <expand macro="heatmap_options" />
42 <expand macro="plotWidthHeight" PLOTWIDTH="11.0" PLOTHEIGHT="9.5" />
40 </when> 43 </when>
41 <when value="scatterplot"> 44 <when value="scatterplot">
42 <expand macro="plotTitle" /> 45 <expand macro="plotTitle" />
43 </when> 46 </when>
44 </conditional> 47 </conditional>