Mercurial > repos > bgruening > deeptools_plot_correlation

comparison plotCorrelation.xml @ 15:714250469582 draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 7150f0c106abd56920767518cc331ef6e4e7f439
author bgruening
date Thu, 18 Feb 2016 11:35:58 -0500
parents 49ac0d30a800
children 7c0b9268fbb9
comparison
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14:e3d508f0a966 15:714250469582
73 <test> 73 <test>
74 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" /> 74 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" />
75 <param name="outFileFormat" value="png" /> 75 <param name="outFileFormat" value="png" />
76 <param name="outFileCorMatrix" value="True" /> 76 <param name="outFileCorMatrix" value="True" />
77 <output name="matrix" file="plotCorrelation_result1.tabular" ftype="tabular" /> 77 <output name="matrix" file="plotCorrelation_result1.tabular" ftype="tabular" />
78 <output name="outFileName" file="plotCorrelation_result1.png" ftype="png" compare="sim_size" delta="100" /> 78 <output name="outFileName" file="plotCorrelation_result1.png" ftype="png" compare="sim_size" delta="200" />
79 </test> 79 </test>
80 <test> 80 <test>
81 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" /> 81 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" />
82 <param name="outFileFormat" value="png" /> 82 <param name="outFileFormat" value="png" />
83 <param name="whatToPlot" value="scatterplot" /> 83 <param name="whatToPlot" value="scatterplot" />
84 <param name="removeOutliers" value="True" /> 84 <param name="removeOutliers" value="True" />
85 <param name="plotTitle" value="Test Plot" /> 85 <param name="plotTitle" value="Test Plot" />
86 <output name="outFileName" file="plotCorrelation_result2.png" ftpye="png" compare="sim_size" delta="100" /> 86 <output name="outFileName" file="plotCorrelation_result2.png" ftpye="png" compare="sim_size" delta="200" />
87 </test> 87 </test>
88 </tests> 88 </tests>
89 <help> 89 <help>
90 <![CDATA[ 90 <![CDATA[
91 What it does 91 What it does