Mercurial > repos > bgruening > deeptools_compute_matrix
diff computeMatrix.xml @ 33:a1b62c76f148 draft
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit b1f975422b307927bbbe245d57609e9464d5d5c8-dirty
| author | bgruening |
|---|---|
| date | Thu, 15 Feb 2018 04:14:38 -0500 |
| parents | 2f7094a2cfd5 |
| children | c7495de3f86f |
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--- a/computeMatrix.xml Mon Feb 05 11:35:45 2018 -0500 +++ b/computeMatrix.xml Thu Feb 15 04:14:38 2018 -0500 @@ -270,7 +270,7 @@ This tool prepares an intermediate file (a gzipped table of values) that contains scores associated with genomic regions. The regions can either be scaled to the same size (using the ``scale-regions`` mode) or you can choose the start, end, or center of each region as the focus point for the score calculations. -For more details, check out the explanation `here <file:///Users/frd2007/Documents/MPI/deepTools/docs/_build/html/content/tools/computeMatrix.html#details>`_. +For more details, check out the explanation `here <https://deeptools.readthedocs.io/en/latest/content/tools/computeMatrix.html#details>`_. The intermediate file produced by ``computeMatrix`` is meant to be used with ``plotHeatmap`` and ``plotProfile``. See the descriptions of ``plotHeatmap`` and ``plotProfile`` for example plots.