--- a/correctGCBias.xml	Tue Aug 06 08:20:47 2013 -0400
+++ b/correctGCBias.xml	Wed Aug 14 07:18:18 2013 -0400
@@ -1,8 +1,9 @@
-<tool id="correctGCBias" name="correctGCBias" version="1.0.1">
-  <description>use the output from computeGCBias to obtain corrected sample files</description>
+<tool id="deeptools_correctGCBias" name="correctGCBias" version="1.0.1">
+  <description>uses the output from computeGCBias to generate corrected BAM files</description>
   <requirements>
-    <requirement type="package" version="1.5.1_59e067cce039cb93add04823c9f51cab202f8c2b">deepTools</requirement>
+    <requirement type="package" version="1.5.1_df852fa1ef13251a17274ee18fbf919fbc515079">deepTools</requirement>
     <requirement type="package" version="0.1">ucsc_tools</requirement>
+    <requirement type="package" >deepTools</requirement>
   </requirements>
   <command>
     #import tempfile
@@ -44,7 +45,7 @@
 
   <param name="GCbiasFrequenciesFile" type="data" format="tabular" label="Output of computeGCBias" />
 
-  <param name="bamInput" format="bam" type="data" label="Input BAM file" help="The BAM file must be sorted and indexed."/>
+  <param name="bamInput" format="bam" type="data" label="Input BAM file" help="This should be same file that was used for computeGCbias. The BAM file must be sorted."/>
 
   <param name="species" type="select" label="Species name abbreviation">
     <option value="hg19">hg19</option>
@@ -111,14 +112,14 @@
 
 .. class:: infomark
 
-If you would like to give us feedback or you run into any trouble, please sent an email to deeptools@googlegroups.com
+If you would like to give us feedback or you run into any trouble, please send an email to deeptools@googlegroups.com
 
 This tool is developed by the `Bioinformatics and Deep-Sequencing Unit`_ at the `Max Planck Institute for Immunobiology and Epigenetics`_.
 
 
 .. _Bioinformatics and Deep-Sequencing Unit: http://www3.ie-freiburg.mpg.de/facilities/research-facilities/bioinformatics-and-deep-sequencing-unit/
 .. _Max Planck Institute for Immunobiology and Epigenetics: http://www3.ie-freiburg.mpg.de
-.. _Fidel Ramirez: ramirez@ie-freiburg.mpg.de
+
 
   </help>