Mercurial > repos > bgruening > deeptools

diff computeGCBias.xml @ 66:1dbd76a58d8b draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit f720d773e34ad90d14d7cae77c1a0bb5d126102c-dirty
author galaxyp
date Sat, 30 May 2015 13:55:46 -0400
parents 9bee2c86eeb1
children
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--- a/computeGCBias.xml	Mon May 25 05:16:10 2015 -0400
+++ b/computeGCBias.xml	Sat May 30 13:55:46 2015 -0400
@@ -113,15 +113,19 @@
     </outputs>
     <tests>
         <test>
-            <param name="bamInput" value="phiX.bam" ftype="bam" />
+            <param name="bamInput" value="paired_chr2L.bam" ftype="bam" />
             <param name="image_format" value="png" />
             <param name="showAdvancedOpt" value="yes" />
             <param name="regionSize" value="1" />
             <param name="fragmentLength" value="100" />
             <param name="ref_source" value="history" />
-            <param name="input1" value="phiX.2bit" />
+            <param name="input1" value="sequence.2bit" />
+            <param name="sampleSize" value="10" />
+            <param name="effectiveGenomeSize_opt" value="specific" />
+            <param name="effectiveGenomeSize" value="23011544" />
+            <param name="region" value="chr2L" />
+            <param name="image_format" value="none" />
             <output name="outFileName" file="computeGCBias_result1.tabular" ftype="tabular" />
-            <output name="outImageName" file="computeGCBias_result1.png" ftype="png" />
         </test>
     </tests>
     <help>