Mercurial > repos > bgruening > data_manager_sylph_database

diff test-data/sylph_databases.loc.test @ 0:2ea34d422df4 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
author bgruening
date Fri, 23 May 2025 09:47:40 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sylph_databases.loc.test	Fri May 23 09:47:40 2025 +0000
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+#This is a tab separated file describing the location of StarAMR databases 
+#used for the StarAMR tool
+#
+#file has this format (white space characters are TAB characters)
+#
+#The columns are:
+#value	name	path    version
+#
+#For example
+#staramr_downloaded_20241004_resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502	ResFinder: tag 4.6.0, commit d1e607b, 2024-08-06 - PointFinder: tag 4.1.1, commit 694919f, 2024-08-08 - PlasmidFinder: commit 3e77502, 2024-03-07 (downloaded 20241004)	/path/to/data
+sylph_downloaded_22052025_fungi-refseq-2024-07-25-c200-v0.3.syldb	sylph database fungi-refseq-2024-07-25-c200-v0.3.syldb	/tmp/tmpwo1n9334/galaxy-dev/tool-data/sylph/fungi-refseq-2024-07-25-c200-v0.3.syldb	eukaryote	FungiRefSeq-2024-07-25	1
+sylph_downloaded_22052025_OceanDNA-c200-v0.3.syldb	sylph database OceanDNA-c200-v0.3.syldb	/tmp/tmpwo1n9334/galaxy-dev/tool-data/sylph/OceanDNA-c200-v0.3.syldb	prokaryote	OceanDNA	1