Mercurial > repos > bgruening > blobtoolkit
comparison macros.xml @ 0:73417c40e518 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/blobtoolkit commit 7c0db48ffd4dbee68fb2320fc5a064bc9c3219d9
| author | bgruening |
|---|---|
| date | Mon, 30 Jan 2023 12:39:22 +0000 |
| parents | |
| children | cbcbcb47b798 |
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| -1:000000000000 | 0:73417c40e518 |
|---|---|
| 1 <macros> | |
| 2 <token name="@TOOL_VERSION@">3.4.0</token> | |
| 3 <token name="@VERSION_SUFFIX@">0</token> | |
| 4 | |
| 5 <xml name="requirements"> | |
| 6 <requirements> | |
| 7 <container type="docker">genomehubs/blobtoolkit:@TOOL_VERSION@</container> | |
| 8 </requirements> | |
| 9 </xml> | |
| 10 <xml name="citations"> | |
| 11 <citations> | |
| 12 <citation type="doi">10.1534/g3.119.400908</citation> | |
| 13 </citations> | |
| 14 </xml> | |
| 15 <xml name="macro_text_input" > | |
| 16 <conditional name="text_input"> | |
| 17 <param name="selector" type="select" label="Genetic text file" help="Include a genetic text file as input"> | |
| 18 <option value="enabled">Enabled</option> | |
| 19 <option value="disabled" selected="true">Disabled</option> | |
| 20 </param> | |
| 21 <when value="enabled"> | |
| 22 <param argument="--text" type="data" format="txt" label="Generic text file"/> | |
| 23 <param argument="--text-cols" type="text" value="" label="Column specification" help="Example: 1=identifiers,2,3=score,total=total_score"> | |
| 24 <sanitizer invalid_char=""> | |
| 25 <valid initial="string.letters,string.digits"> | |
| 26 <add value="_" /> | |
| 27 <add value="," /> | |
| 28 <add value="=" /> | |
| 29 <add value="-" /> | |
| 30 <add value="#" /> | |
| 31 </valid> | |
| 32 </sanitizer> | |
| 33 <validator type="regex">[0-9a-zA-Z=,_#-]+</validator> | |
| 34 </param> | |
| 35 <param argument="--text-header" type="boolean" truevalue="--text-header" falsevalue="" checked="false" label="Text has header row" help="Set the flag if a text file contains a header row" /> | |
| 36 <param argument="--text-delimiter" type="select" label="Text delimiter" help="Character used as delimiter in the text file"> | |
| 37 <option value=",">Comma</option> | |
| 38 <option value="\t">Tabulation</option> | |
| 39 <option value="whitespace">Whitespace</option> | |
| 40 </param> | |
| 41 <yield/> | |
| 42 </when> | |
| 43 <when value="disabled"/> | |
| 44 </conditional> | |
| 45 | |
| 46 </xml> | |
| 47 </macros> |