Mercurial > repos > bgruening > bedtools_test_bag

diff bedpeToBam.xml @ 12:c782e0edc4f1 draft default tip

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author bgruening
date Thu, 19 Jun 2014 10:12:00 -0400
parents 75d323631dce
children
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--- a/bedpeToBam.xml	Wed Jun 18 15:07:04 2014 -0400
+++ b/bedpeToBam.xml	Thu Jun 19 10:12:00 2014 -0400
@@ -1,4 +1,4 @@
-<tool id="bedtools_bedpetobam" name="Convert from BEDPE to BAM" version="0.1.0">
+<tool id="bedtools_bedpetobam" name="Convert from BEDPE to BAM" version="@WRAPPER_VERSION@.0">
     <description></description>
     <macros>
         <import>macros.xml</import>
@@ -12,14 +12,12 @@
         -i '$input'
         -g $genome
         &gt; '$output'
-
     </command>
     <inputs>
         <param format="bed,gff,vcf" name="input" type="data" label="BED/VCF/GFF file"/>
         <expand macro="genome" />
         <param name="mapq" type="integer" label="Set a mapping quality (SAM MAPQ field) value for all BED entries" value="255" />
         <param name="ubam" type="boolean" label="Write uncompressed BAM output." truevalue="-ubam" falsevalue="" checked="false"/>
-
     </inputs>
     <outputs>
         <data format="bam" name="output" metadata_source="input" label="${input.name} (as BAM)"/>