Mercurial > repos > bgruening > bedtools_test_bag

comparison annotateBed.xml @ 12:c782e0edc4f1 draft default tip

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author bgruening
date Thu, 19 Jun 2014 10:12:00 -0400
parents e526617a6bb9
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11:e526617a6bb9 12:c782e0edc4f1
1 <tool id="bedtools_annotatebed" name="AnnotateBed" version="0.2.0"> 1 <tool id="bedtools_annotatebed" name="AnnotateBed" version="@WRAPPER_VERSION@.0">
2 <description></description> 2 <description></description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
12 #for $bed in $names.beds: 12 #for $bed in $names.beds:
13 $bed.input 13 $bed.input
14 #end for 14 #end for
15 15
16 #if $names.names_select == 'yes': 16 #if $names.names_select == 'yes':
17 -names 17 -names
18 #for $bed in $names.beds: 18 #for $bed in $names.beds:
19 $bed.inputName 19 $bed.inputName
20 #end for 20 #end for
21 #end if 21 #end if
22 $strand 22 $strand
23 $counts 23 $counts
24 $both 24 $both
25 &gt; $output 25 &gt; $output