Mercurial > repos > bgruening > augustus

diff augustus.xml @ 4:c243e17fb224 draft

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Uploaded
author bgruening
date Fri, 07 Jun 2013 02:30:21 -0400
parents 702d9e042295
children bcfe8e0731f8
line wrap: on
line diff
--- a/augustus.xml	Thu Jun 06 13:26:37 2013 -0400
+++ b/augustus.xml	Fri Jun 07 02:30:21 2013 -0400
@@ -151,7 +151,7 @@
             <output name="output" file="human_augustus_utr-on.gtf" ftype="gtf" />
         </test>
         <test>
-            <param name="input_genome" value="HS04636_augustus.fa" ftype="fasta" />
+            <param name="input_genome" value="human_augustus.fa" ftype="fasta" />
             <param name="organism" value="human" />
             <param name="utr" value="--UTR=on" />
             <param name="gff" value="--gff3=on" />
@@ -162,10 +162,10 @@
             <param name="organism" value="arabidopsis" />
             <param name="singlestrand" value="--singlestrand=true" />
             <param name="mea" value="--mea=1" />
-            <output name="output" file="arabidopsis_augustus_utr-off_singlestrand-on_mea-on" ftype="gtf" />
+            <output name="output" file="arabidopsis_augustus_utr-off_singlestrand-on_mea-on.gtf" ftype="gtf" />
         </test>
         <test>
-            <param name="input_genome" value="HS04636_augustus.fa" ftype="fasta" />
+            <param name="input_genome" value="human_augustus.fa" ftype="fasta" />
             <param name="organism" value="human" />
             <param name="protein" value="--protein=on" />
             <param name="codingseq" value="--codingseq=on" />