view test-data/summarize_taxa_L6.tabular @ 0:c1bd0c560018 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime commit bcbe76277f3e60303faf826f8ce7f018bc663a9a-dirty
author bebatut
date Tue, 02 Feb 2016 05:50:37 -0500
parents
children
line wrap: on
line source

#SampleID	BarcodeSequence	LinkerPrimerSequence	SampleType	Year	Month	Day	Subject	ReportedAntibioticUsage	DaysSinceExperimentStart	Description	k__Bacteria;p__Bacteroidetes	k__Bacteria;p__Firmicutes	k__Bacteria;p__Bacteroidetes;c__Bacteroidia	k__Bacteria;p__Firmicutes;c__Clostridia	k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales	k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae	k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae	k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides	k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;Other	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Roseburia	k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Faecalibacterium
L1S8	AGCTGACTAGTC	GTGCCAGCMGCCGCGGTAA	gut	2008	10	28	1	Yes	0	1_Fece_10_28_2008	0.625	0.375	0.625	0.375	0.625	0.375	0.625	0.0	0.0	0.125	0.25	0.625	0.0	0.0	0.125	0.0	0.25
L1S140	ATGGCAGCTCTA	GTGCCAGCMGCCGCGGTAA	gut	2008	10	28	2	Yes	0	2_Fece_10_28_2008	0.875	0.125	0.875	0.125	0.875	0.125	0.875	0.0	0.0	0.125	0.0	0.875	0.0	0.0	0.125	0.0	0.0
L1S57	ACACACTATGGC	GTGCCAGCMGCCGCGGTAA	gut	2009	1	20	1	No	84	1_Fece_1_20_2009	0.714285714286	0.285714285714	0.714285714286	0.285714285714	0.714285714286	0.285714285714	0.714285714286	0.0	0.285714285714	0.0	0.0	0.714285714286	0.0	0.285714285714	0.0	0.0	0.0
L1S208	CTGAGATACGCG	GTGCCAGCMGCCGCGGTAA	gut	2009	1	20	2	No	84	2_Fece_1_20_2009	0.777777777778	0.222222222222	0.777777777778	0.222222222222	0.777777777778	0.222222222222	0.555555555556	0.222222222222	0.0	0.222222222222	0.0	0.555555555556	0.222222222222	0.0	0.0	0.222222222222	0.0
L1S76	ACTACGTGTGGT	GTGCCAGCMGCCGCGGTAA	gut	2009	2	17	1	No	112	1_Fece_2_17_2009	0.75	0.25	0.75	0.25	0.75	0.25	0.75	0.0	0.0	0.25	0.0	0.75	0.0	0.0	0.25	0.0	0.0
L1S105	AGTGCGATGCGT	GTGCCAGCMGCCGCGGTAA	gut	2009	3	17	1	No	140	1_Fece_3_17_2009	0.857142857143	0.142857142857	0.857142857143	0.142857142857	0.857142857143	0.142857142857	0.857142857143	0.0	0.0	0.0	0.142857142857	0.857142857143	0.0	0.0	0.0	0.0	0.142857142857
L1S257	CCGACTGAGATG	GTGCCAGCMGCCGCGGTAA	gut	2009	3	17	2	No	140	2_Fece_3_17_2009	1.0	0.0	1.0	0.0	1.0	0.0	0.833333333333	0.166666666667	0.0	0.0	0.0	0.833333333333	0.166666666667	0.0	0.0	0.0	0.0
L1S281	CCTCTCGTGATC	GTGCCAGCMGCCGCGGTAA	gut	2009	4	14	2	No	168	2_Fece_4_14_2009	0.875	0.125	0.875	0.125	0.875	0.125	0.625	0.25	0.0	0.0	0.125	0.625	0.25	0.0	0.0	0.0	0.125