Mercurial > repos > bebatut > qiime
diff test-data/split_fastq_libraries_log.txt @ 0:c1bd0c560018 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime commit bcbe76277f3e60303faf826f8ce7f018bc663a9a-dirty
| author | bebatut |
|---|---|
| date | Tue, 02 Feb 2016 05:50:37 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/split_fastq_libraries_log.txt Tue Feb 02 05:50:37 2016 -0500 @@ -0,0 +1,53 @@ +Input file paths +Mapping filepath: /home/cidam/Berenice/asaim/framework/lib/galaxy-master/database/files/000/dataset_15.dat (md5: 4f17f8d2fbfd80c72d7958f39c5c5286) +Sequence read filepath: /home/cidam/Berenice/asaim/framework/lib/galaxy-master/database/files/000/dataset_12.dat (md5: 9d4f2526cd83c61358d737e8ead741bd) +Barcode read filepath: /home/cidam/Berenice/asaim/framework/lib/galaxy-master/database/files/000/dataset_11.dat (md5: 3856d8f889198dc37ffd61b231c03257) + +Quality filter results +Total number of input sequences: 250 +Barcode not in mapping file: 134 +Read too short after quality truncation: 21 +Count of N characters exceeds limit: 6 +Illumina quality digit = 0: 0 +Barcode errors exceed max: 3 + +Result summary (after quality filtering) +Median sequence length: 132.50 +L1S76 14 +L1S281 12 +L1S8 11 +L1S208 11 +L1S140 11 +L1S105 10 +L1S257 9 +L1S57 8 +L6S93 0 +L6S68 0 +L6S20 0 +L5S240 0 +L5S222 0 +L5S203 0 +L5S174 0 +L5S155 0 +L5S104 0 +L4S63 0 +L4S137 0 +L4S112 0 +L3S378 0 +L3S360 0 +L3S341 0 +L3S313 0 +L3S294 0 +L3S242 0 +L2S382 0 +L2S357 0 +L2S309 0 +L2S240 0 +L2S222 0 +L2S204 0 +L2S175 0 +L2S155 0 + +Total number seqs written 86 +--- +