Mercurial > repos > bebatut > qiime

comparison test-data/split_fastq_libraries_log.txt @ 0:c1bd0c560018 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime commit bcbe76277f3e60303faf826f8ce7f018bc663a9a-dirty
author bebatut
date Tue, 02 Feb 2016 05:50:37 -0500
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-1:000000000000 0:c1bd0c560018
1 Input file paths
2 Mapping filepath: /home/cidam/Berenice/asaim/framework/lib/galaxy-master/database/files/000/dataset_15.dat (md5: 4f17f8d2fbfd80c72d7958f39c5c5286)
3 Sequence read filepath: /home/cidam/Berenice/asaim/framework/lib/galaxy-master/database/files/000/dataset_12.dat (md5: 9d4f2526cd83c61358d737e8ead741bd)
4 Barcode read filepath: /home/cidam/Berenice/asaim/framework/lib/galaxy-master/database/files/000/dataset_11.dat (md5: 3856d8f889198dc37ffd61b231c03257)
5
6 Quality filter results
7 Total number of input sequences: 250
8 Barcode not in mapping file: 134
9 Read too short after quality truncation: 21
10 Count of N characters exceeds limit: 6
11 Illumina quality digit = 0: 0
12 Barcode errors exceed max: 3
13
14 Result summary (after quality filtering)
15 Median sequence length: 132.50
16 L1S76 14
17 L1S281 12
18 L1S8 11
19 L1S208 11
20 L1S140 11
21 L1S105 10
22 L1S257 9
23 L1S57 8
24 L6S93 0
25 L6S68 0
26 L6S20 0
27 L5S240 0
28 L5S222 0
29 L5S203 0
30 L5S174 0
31 L5S155 0
32 L5S104 0
33 L4S63 0
34 L4S137 0
35 L4S112 0
36 L3S378 0
37 L3S360 0
38 L3S341 0
39 L3S313 0
40 L3S294 0
41 L3S242 0
42 L2S382 0
43 L2S357 0
44 L2S309 0
45 L2S240 0
46 L2S222 0
47 L2S204 0
48 L2S175 0
49 L2S155 0
50
51 Total number seqs written 86
52 ---
53