Mercurial > repos > bebatut > plot_grouped_barplot

comparison plot_grouped_barplot.xml @ 2:7cdad1c7d6ea draft default tip

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planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_grouped_barplot commit c6ba903395dc6d41cb318c7d95a2d9cf3ca65313-dirty
author bebatut
date Mon, 18 Apr 2016 10:05:48 -0400
parents ed13c93bfdf0
children
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1:ed13c93bfdf0 2:7cdad1c7d6ea
103 <filter>output_format=="svg"</filter> 103 <filter>output_format=="svg"</filter>
104 </data> 104 </data>
105 </outputs> 105 </outputs>
106 106
107 <tests> 107 <tests>
108 <test>
109 <param name="input_file" value="input_file.txt"/>
110 <param name='header' value="FALSE"/>
111 <param name="output_format" value="pdf"/>
112 <param name="samples_0|name" value="A"/>
113 <param name="samples_0|column_id" value="2"/>
114 <param name="samples_0|color" value="blue"/>
115 <param name="samples_1|name" value="B"/>
116 <param name="samples_1|column_id" value="3"/>
117 <param name="samples_1|color" value="red"/>
118 <param name="replace_null" value="FALSE"/>
119 <param name="order" value="FALSE"/>
120 <param name="names_column" value="1"/>
121 <param name='xlab' value=""/>
122 <param name='log' value="FALSE"/>
123 <param name='bottom_margin' value="5"/>
124 <param name="left_margin" value="19"/>
125 <param name='top_margin' value="1"/>
126 <param name='right_margin' value="1"/>
127 <param name="legend_pos" value="topright"/>
128 <output name="output_pdf_file" file="output_file.pdf"/>
129 </test>
108 </tests> 130 </tests>
109 131
110 <help><![CDATA[ 132 <help><![CDATA[
111 **What it does** 133 **What it does**
112 134
113 This tool plot a grouped barplot from a tabular file into different format files given different customizable parameters: 135 This tool plot a grouped barplot with multiple data:
114 136
115 .. image:: $PATH_TO_IMAGES/output.png 137 .. image:: $PATH_TO_IMAGES/output.png
116 :scale: 50 % 138 :scale: 50 %
117 139
118 This tool relies on R's barplot function. 140 This tool relies on R's barplot function. The input file must be a tabular file with multiple columns: a column with row names (for bar names) and a least a column with data. The output image is customizable (margin, legend positions, ...) and can be export in different format.
119
120 ]]></help> 141 ]]></help>
121 142
122 <citations> 143 <citations>
123 </citations> 144 </citations>
124 </tool> 145 </tool>